STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRIM45Tripartite motif containing 45. (530 aa)    
Predicted Functional Partners:
G3SMP6_LOXAF
C2H2-type domain-containing protein.
   
 0.807
TAB2
TGF-beta activated kinase 1 (MAP3K7) binding protein 2.
    
 
 0.679
STAC
SH3 and cysteine rich domain.
    
 
 0.647
FCHSD2
FCH and double SH3 domains 2.
    
 
 0.640
SORBS1
Sorbin and SH3 domain containing 1.
    
 
 0.639
SPART
Spartin.
      
 0.637
TRAT1
T cell receptor associated transmembrane adaptor 1.
      
 0.592
KNOP1
Lysine rich nucleolar protein 1.
    
 
 0.573
TRIM41
Uncharacterized protein.
      
 0.565
UBE2D1
Ubiquitin conjugating enzyme E2 D1; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.540
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.