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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LARP4La ribonucleoprotein domain family member 4. (723 aa)    
Predicted Functional Partners:
RACK1
Receptor for activated C kinase 1.
    
 
 0.632
RPS5
Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
     
 0.569
EIF4G2
Eukaryotic translation initiation factor 4 gamma 2.
   
 
 0.561
COX14
Cytochrome c oxidase assembly factor COX14.
      
 0.516
MCTS1
Malignant T-cell-amplified sequence.
     
 0.513
SYNCRIP
Synaptotagmin binding cytoplasmic RNA interacting protein.
   
 
 0.476
SLC48A1
Solute carrier family 48 member 1.
      
 0.453
RPS3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
     
 0.442
RPS9
Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
     
 0.428
DDX3X
DEAD-box helicase 3 X-linked; Belongs to the DEAD box helicase family.
    
 0.421
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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