STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LARP4La ribonucleoprotein domain family member 4. (723 aa)    
Predicted Functional Partners:
FLNA
Filamin A.
    
   0.900
RACK1
Receptor for activated C kinase 1.
    
 
 0.816
G3BP1
G3BP stress granule assembly factor 1.
   
 
 0.717
LARP4B
La ribonucleoprotein domain family member 4B.
   
 
 0.663
MTDH
Metadherin.
   
 
 0.649
SYNCRIP
Synaptotagmin binding cytoplasmic RNA interacting protein.
   
 
 0.636
EIF4G2
Eukaryotic translation initiation factor 4 gamma 2.
   
 
 0.635
ATXN2
Ataxin 2.
   
 
 0.620
RPS3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 0.580
RPS5
Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
     
 0.562
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.