STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LGALS3Galectin. (250 aa)    
Predicted Functional Partners:
LGALS3BP
SRCR domain-containing protein.
    
 
 0.870
CLEC7A
C-type lectin domain containing 7A.
   
 0.755
G3U868_LOXAF
Ig-like domain-containing protein.
   
 
 0.744
MUC1
SEA domain-containing protein.
      
 0.723
G3SP45_LOXAF
Ig-like domain-containing protein.
   
 0.714
PTPRC
Protein tyrosine phosphatase receptor type C.
    
 
 0.707
FN1
Fibronectin 1.
   
 
 0.706
TRIM16
Uncharacterized protein.
    
 
 0.706
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
   
 0.679
EGFR
Receptor protein-tyrosine kinase.
    
 
 0.655
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.