STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABCA12ATP binding cassette subfamily A member 12. (2597 aa)    
Predicted Functional Partners:
TRIP12
Thyroid hormone receptor interactor 12.
     
 0.731
ABCC6
ATP binding cassette subfamily C member 6.
   
 0.564
MGP
Matrix Gla protein; Associates with the organic matrix of bone and cartilage.
   
  
 0.564
NFIA
Uncharacterized protein.
      
 0.480
GRB14
Growth factor receptor bound protein 14.
   
  
 0.468
OSBPL6
Oxysterol-binding protein; Belongs to the OSBP family.
      
 0.463
SMPX
Small muscle protein X-linked.
      
 0.461
APOA4
Apolipoprotein A4.
    
 0.454
ABCA6
ATP binding cassette subfamily A member 6.
  
 
 
0.436
NR1H4
Nuclear receptor subfamily 1 group H member 4.
    
 0.426
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.