Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GON4LMyb-like domain-containing protein. (2220 aa)    
Predicted Functional Partners:
CRAMP1
Cramped chromatin regulator homolog 1.
   
 
 0.850
PDIA2
Protein disulfide isomerase family A member 2.
    
 0.738
SMPD4
Sphingomyelin phosphodiesterase 4.
   
  
 0.692
SS18L2
Uncharacterized protein.
    
 
 0.673
G3ULC9_LOXAF
Uncharacterized protein.
    
 
 0.673
ASH1L
ASH1 like histone lysine methyltransferase.
   
 0.634
FANCA
FA complementation group A.
     
 0.548
RAI1
Retinoic acid induced 1.
   
 0.543
ASPHD2
Aspartate beta-hydroxylase domain containing 2.
     
 0.538
ASPHD1
Aspartate beta-hydroxylase domain containing 1.
     
 0.538
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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