STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GON4LMyb-like domain-containing protein. (2220 aa)    
Predicted Functional Partners:
LSM10
LSM10, U7 small nuclear RNA associated.
    
 0.618
CRAMP1
Cramped chromatin regulator homolog 1.
   
 
 0.574
POLD1
DNA polymerase.
   
 0.544
FANCM
FA complementation group M.
   
 0.540
POLD2
DNA polymerase delta 2, accessory subunit.
    
 0.531
LSM11
LSM11, U7 small nuclear RNA associated.
      
 0.525
G3SSC9_LOXAF
Tudor domain-containing protein.
    
 0.515
MUS81
MUS81 structure-specific endonuclease subunit.
    
 0.510
ASH1L
ASH1 like histone lysine methyltransferase.
   
 
 0.500
SNRPE
Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development.
   
 0.463
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.