STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3SVS9_LOXAFTACC_C domain-containing protein. (629 aa)    
Predicted Functional Partners:
CKAP5
Cytoskeleton associated protein 5.
   
 0.984
AURKA
Aurora kinase A; Belongs to the protein kinase superfamily.
   
 0.937
CDCA8
Cell division cycle associated 8.
   
 
 0.922
PLK1
Serine/threonine-protein kinase PLK.
   
 0.917
BUB1B
Uncharacterized protein.
   
 
 0.904
KIF22
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.899
G3T6E7_LOXAF
Uncharacterized protein.
    
 0.829
CLTC
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 
 0.827
NOTCH3
Notch receptor 3.
    
  0.826
CCNA2
Cyclin A2; Belongs to the cyclin family.
   
 
 0.820
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.