Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CNTNAP5Contactin associated protein like 5. (1307 aa)    
Predicted Functional Partners:
AASDHPPT
Aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase.
 
      0.733
SHANK3
ANK_REP_REGION domain-containing protein.
   
 
 0.663
CNTN1
Contactin 1.
   
 0.647
CNTN2
Contactin 2.
   
 0.643
NFASC
Neurofascin.
   
 0.631
KCNQ2
Potassium voltage-gated channel subfamily Q member 2; Belongs to the potassium channel family.
   
 
 0.596
SHANK2
SH3 and multiple ankyrin repeat domains 2.
    
 
 0.569
EHMT1
Euchromatic histone lysine methyltransferase 1.
      
 0.551
PTCHD1
Patched domain containing 1.
   
  
 0.540
CNTN4
Contactin 4.
   
 0.513
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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