STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFMBT2Uncharacterized protein. (740 aa)    
Predicted Functional Partners:
G3U750_LOXAF
Uncharacterized protein.
 
     
0.900
SFMBT1
Scm like with four mbt domains 1.
   
 
  0.798
SLC38A4
Solute carrier family 38 member 4.
      
 0.599
RYBP
RING1 and YY1 binding protein.
    
 0.564
YAF2
YY1 associated factor 2.
    
 0.564
SMOC1
SPARC related modular calcium binding 1.
      
 0.534
HMG20A
High mobility group 20A.
   
 
 0.525
JADE1
Jade family PHD finger 1.
      
 0.519
GATM
Glycine amidinotransferase.
    
 
 0.494
UBE2O
Uncharacterized protein.
   
 0.458
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.