Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
G3SVV7_LOXAFUncharacterized protein. (159 aa)    
Predicted Functional Partners:
VPS9D1
VPS9 domain containing 1.
      
 0.623
DSTYK
Dual serine/threonine and tyrosine protein kinase.
      
 0.619
FANCA
FA complementation group A.
      
 0.617
SPIRE2
Spire type actin nucleation factor 2.
      
 0.578
MNS1
Meiosis specific nuclear structural 1.
      
 0.558
AFG3L2
AFG3 like matrix AAA peptidase subunit 2.
   
  
 0.519
LOC100660900
AAA domain-containing protein.
   
  
 0.519
TTC14
Tetratricopeptide repeat domain 14.
      
 0.499
ATF7IP2
Activating transcription factor 7 interacting protein 2.
      
 0.494
DEF8
Differentially expressed in FDCP 8 homolog.
      
 0.491
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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