STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NALCNUncharacterized protein. (1210 aa)    
Predicted Functional Partners:
UNC80
Unc-80 homolog, NALCN channel complex subunit.
   
 0.969
UNC79
Unc-79 homolog, NALCN channel complex subunit.
   
 0.961
G3U3A7_LOXAF
Ion_trans domain-containing protein.
 
     0.941
FAM155A-2
Uncharacterized protein.
   
 
 0.688
FAM155B
Family with sequence similarity 155 member B.
   
 
 0.688
SCN1B
Sodium voltage-gated channel beta subunit 1.
   
 0.625
CDH8
Cadherin 8; Cadherins are calcium-dependent cell adhesion proteins.
   
  
 0.585
ASIC4
Acid sensing ion channel subunit family member 4; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
      
 0.551
SCN3B
Sodium voltage-gated channel beta subunit 3.
    
 0.528
FBXL4
F-box and leucine rich repeat protein 4.
      
 0.520
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.