Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BPIBactericidal permeability increasing protein. (483 aa)    
Predicted Functional Partners:
G3UH32_LOXAF
Uncharacterized protein.
   
 0.850
G3UMR8_LOXAF
Uncharacterized protein.
   
 0.850
KNG1
Kininogen 1.
   
 
 0.564
LY96
ML domain-containing protein.
     
 0.541
TLR4
Toll like receptor 4; Belongs to the Toll-like receptor family.
   
 
 0.520
G3U2U4_LOXAF
Serum amyloid A protein; Major acute phase reactant. Apolipoprotein of the HDL complex.
   
 
 0.452
MMP8
Matrix metallopeptidase 8.
   
 
 0.439
AZU1
Azurocidin 1.
   
 
 0.439
CDK5RAP1
CDK5 regulatory subunit associated protein 1.
 
  
 
 0.417
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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