STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SYT14Synaptotagmin 14. (536 aa)    
Predicted Functional Partners:
SERTAD4
SERTA domain containing 4.
 
    
 0.575
STX3
Syntaxin 3; Belongs to the syntaxin family.
   
 0.545
C3orf67
Chromosome 3 open reading frame 67.
      
 0.501
KCNJ4
Potassium voltage-gated channel subfamily J member 4.
      
 0.494
STX1B
Syntaxin 1B; Belongs to the syntaxin family.
   
 0.472
STX1A
Syntaxin 1A.
   
 0.472
ITSN2
Intersectin 2.
     
 0.471
BAIAP2L2
BAI1 associated protein 2 like 2.
   
  
 0.471
G3U095_LOXAF
Uncharacterized protein.
     
 0.471
STX4
Syntaxin 4.
   
 0.466
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.