Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PAX4Paired box 4. (350 aa)    
Predicted Functional Partners:
INS
Insulin; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver.
   
 0.822
SUZ12
SUZ12 polycomb repressive complex 2 subunit.
    
 0.738
SST
Somatostatin.
      
 0.737
NEUROG3
Neurogenin 3.
   
 0.725
FOXA1
Forkhead box A1.
   
 0.714
FOXA2
Forkhead box A2.
   
 0.679
POU1F1
POU domain protein.
   
 0.653
NKX2-2
NK2 homeobox 2.
   
 
 0.645
G3T461_LOXAF
Uncharacterized protein.
    
 0.619
MYB
MYB proto-oncogene, transcription factor.
     
 0.619
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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