STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC17A4Solute carrier family 17 member 4. (468 aa)    
Predicted Functional Partners:
SLC32A1
Solute carrier family 32 member 1.
   
 
 0.528
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 
 0.506
G3UF18_LOXAF
C2 domain-containing protein.
     
 0.504
SLC18A3
Solute carrier family 18 member A3.
     
 0.490
ABCC4
ATP binding cassette subfamily C member 4.
      
 0.488
SLC22A8
Solute carrier family 22 member 8.
  
 
 0.473
SLC22A6
Solute carrier family 22 member 6.
  
 
 0.467
SYT1
Synaptotagmin 1.
   
 
 0.430
SYT2
Synaptotagmin 2.
   
 
 0.430
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.424
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.