STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BEND3BEN domain containing 3. (828 aa)    
Predicted Functional Partners:
ERCC6L
ERCC excision repair 6 like, spindle assembly checkpoint helicase.
    
 
 0.788
BANP
BTG3 associated nuclear protein.
      
 0.680
MLEC
Malectin.
      
 0.671
SERPINA12
Serpin family A member 12; Belongs to the serpin family.
     
 0.665
SCML4
SAM domain-containing protein.
      
 0.580
SERPINA4
Serpin family A member 4; Belongs to the serpin family.
     
 0.579
SERPINA11
Serpin family A member 11; Belongs to the serpin family.
     
 0.578
SEC63
SEC63 homolog, protein translocation regulator.
      
 0.556
SERPINA10
Serpin family A member 10; Belongs to the serpin family.
     
 0.552
QRSL1
Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the amidase family. GatA subfamily.
      
 0.546
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.