STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PEBP4Phosphatidylethanolamine binding protein 4. (175 aa)    
Predicted Functional Partners:
C16orf89
Chromosome 16 open reading frame 89.
   
  
 0.727
CFAP161
Cilia and flagella associated protein 161.
   
  
 0.704
DAP3
Death associated protein 3.
   
 
 0.670
MRPL44
Mitochondrial ribosomal protein L44.
   
 
 0.640
KSR2
Kinase suppressor of ras 2.
    
 0.639
MRPL10
Mitochondrial ribosomal protein L10.
   
 
 0.638
MRPL40
Mitochondrial ribosomal protein L40.
   
 
 0.636
MRPL46
Mitochondrial ribosomal protein L46.
   
 
 0.635
MRPL16
Mitochondrial ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.
   
 
 0.631
MRPL19
Mitochondrial ribosomal protein L19.
   
 
 0.627
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.