STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TBCATubulin-specific chaperone A; Belongs to the TBCA family. (108 aa)    
Predicted Functional Partners:
TBCE
Uncharacterized protein.
    
 0.953
TBCD
Tubulin folding cofactor D.
    
 0.902
TBCEL
Ubiquitin-like domain-containing protein.
      
 0.737
VBP1
Prefoldin subunit 3; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit alpha family.
   
   0.734
PFDN6
Prefoldin subunit 6.
   
 
 0.670
TBCB
Tubulin folding cofactor B.
   
 
 0.614
COX6C
Cytochrome c oxidase subunit 6C.
   
  
 0.607
TBCC
Tubulin folding cofactor C.
      
 0.598
COX7C
Cytochrome c oxidase subunit 7C.
   
    0.564
SEC61G
SEC61 translocon gamma subunit.
   
    0.562
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.