Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SYNE3Spectrin repeat containing nuclear envelope family member 3. (975 aa)    
Predicted Functional Partners:
SUN1
Sad1 and UNC84 domain containing 1.
    
 0.824
SUN2
Sad1 and UNC84 domain containing 2.
    
 0.798
CCDC155
Coiled-coil domain containing 155.
    
 0.733
SYNE4
Spectrin repeat containing nuclear envelope family member 4.
     
 0.716
SUN3
Sad1 and UNC84 domain containing 3.
    
 0.700
SYNE1
Spectrin repeat containing nuclear envelope protein 1.
    
0.695
SUN5
Sad1 and UNC84 domain containing 5.
    
 0.641
SPAG4
Sperm associated antigen 4.
    
 0.626
CLMN
Calmin.
    
  0.542
SYNE2
KASH domain-containing protein.
 
  
 
0.414
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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