STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODC1Ornithine decarboxylase 1; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (461 aa)    
Predicted Functional Partners:
SRM
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
  
 0.985
OAZ1
Ornithine decarboxylase antizyme 1.
    
 0.978
AGMAT
Agmatinase; Belongs to the arginase family.
  
 
 0.964
ARG2
Arginase.
  
 
 0.963
ARG1
Arginase.
  
 
 0.959
SAT1
Spermidine/spermine N1-acetyltransferase 1.
    
 0.928
AOC1
Amine oxidase.
   
 
 0.918
G3TW67_LOXAF
Amine oxidase; Belongs to the copper/topaquinone oxidase family.
   
 
 0.918
OAZ2
Ornithine decarboxylase antizyme 2.
    
 0.866
OAZ3
Ornithine decarboxylase antizyme 3.
    
 0.853
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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