STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCLOPiccolo presynaptic cytomatrix protein. (4746 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
   
 0.708
BSN
Bassoon presynaptic cytomatrix protein.
  
0.574
MUC17
Uncharacterized protein.
   
 0.559
RAPGEF4
Rap guanine nucleotide exchange factor 4.
    
 
 0.551
MTMR2
Myotubularin related protein 2.
      
 0.547
MMRN1
Multimerin 1.
    
 0.546
XKR6
XK-related protein.
      
 0.544
RABAC1
PRA1 family protein.
    
 
 0.530
PEAR1
Platelet endothelial aggregation receptor 1.
     
 0.518
THEMIS2
Thymocyte selection associated family member 2.
      
 0.508
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.