STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SYT9Synaptotagmin 9. (491 aa)    
Predicted Functional Partners:
SYT1
Synaptotagmin 1.
   
 0.618
SYT2
Synaptotagmin 2.
   
 0.618
SYT10
Synaptotagmin 10.
   
  0.589
STON2
Stonin-2; Adapter protein involved in endocytic machinery. Involved in the synaptic vesicle recycling. May facilitate clathrin-coated vesicle uncoating; Belongs to the Stoned B family.
     
  0.583
ITSN2
Intersectin 2.
     
 0.564
G3U095_LOXAF
Uncharacterized protein.
     
 0.564
SYT11
Synaptotagmin 11.
    
 0.531
SYT4
Synaptotagmin 4.
    
  0.522
VAMP8
Vesicle associated membrane protein 8.
     
 0.498
SYT3
Synaptotagmin 3.
   
  0.495
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.