STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CHRNA4Cholinergic receptor nicotinic alpha 4 subunit. (614 aa)    
Predicted Functional Partners:
CHRNB3
Cholinergic receptor nicotinic beta 3 subunit.
  
0.973
CHRNB2
Cholinergic receptor nicotinic beta 2 subunit.
  
0.972
CHRNA6
Cholinergic receptor nicotinic alpha 6 subunit.
  
0.964
LYNX1
Ly6/neurotoxin 1.
    
 0.954
CHRNB4
Cholinergic receptor nicotinic beta 4 subunit.
  
0.952
CHRNA3
Cholinergic receptor nicotinic alpha 3 subunit.
  
0.951
CHRNA5
Cholinergic receptor nicotinic alpha 5 subunit.
  
0.935
LYPD6B
LY6/PLAUR domain containing 6B.
    
 0.888
LYPD6
LY6/PLAUR domain containing 6.
    
 0.888
JAK2
Tyrosine-protein kinase.
   
 0.872
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.