STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMS1PMS1 homolog 1, mismatch repair system component. (927 aa)    
Predicted Functional Partners:
MLH1
MutL homolog 1.
  
 
0.988
MSH6
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
 
 0.983
MSH2
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
 
 0.980
MSH4
MutS homolog 4.
 
 0.937
MSH3-2
DNA_MISMATCH_REPAIR_2 domain-containing protein.
 
 0.916
MSH5
DNA_MISMATCH_REPAIR_2 domain-containing protein.
  
 0.914
MSH3
Uncharacterized protein.
 
 0.900
EXO1
Exonuclease 1.
   
 0.899
PMS2
PMS1 homolog 2, mismatch repair system component.
  
0.847
MLH3
MutL homolog 3.
    
0.822
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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