STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC60Coiled-coil domain containing 60. (500 aa)    
Predicted Functional Partners:
EPS8L2
EPS8 like 2.
      
 0.571
SYTL1
Synaptotagmin like 1.
      
 0.567
UBXN11
UBX domain protein 11.
      
 0.532
TEX9
Testis expressed 9.
      
 0.510
FRMD8
FERM domain containing 8.
      
 0.453
RABL2A
Uncharacterized protein.
      
 0.448
GLOD4
Glyoxalase domain containing 4.
      
 0.445
PKN3
Protein kinase N3.
      
 0.403
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.