STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC60Coiled-coil domain containing 60. (500 aa)    
Predicted Functional Partners:
UBXN11
UBX domain protein 11.
      
 0.698
SYTL1
Synaptotagmin like 1.
      
 0.672
EPS8L2
EPS8 like 2.
      
 0.661
PKN3
Protein kinase N3.
      
 0.654
TEX9
Testis expressed 9.
      
 0.632
CUNH4orf22
Uncharacterized protein.
   
    0.602
FRMD8
FERM domain containing 8.
      
 0.569
CIT
Citron Rho-interacting kinase; Plays a role in cytokinesis. Displays serine/threonine protein kinase activity; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
      
 0.568
UNC5A
Unc-5 netrin receptor A.
      
 0.562
HSF2
Heat shock transcription factor 2.
      
 0.560
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.