Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MYL1Myosin light chain 1. (187 aa)    
Predicted Functional Partners:
MYLPF
Myosin light chain, phosphorylatable, fast skeletal muscle.
   
 0.997
TNNC2
Troponin C2, fast skeletal type.
  
0.966
MYH13
Myosin heavy chain 13; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.964
NEB
Nebulin.
   
 
 0.953
MYL3
Myosin light chain 3.
  
 
0.941
MYL4
Myosin light chain 4.
  
 
 
0.940
TNNI1
Troponin I1, slow skeletal type.
   
 0.936
MYH1
Myosin heavy chain 1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.934
MYH8
Myosin heavy chain 8; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.928
TNNI2
Troponin I2, fast skeletal type.
   
 0.926
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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