STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSD1Nuclear receptor binding SET domain protein 1. (2348 aa)    
Predicted Functional Partners:
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
    
 0.692
PLOD3
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.
    
 0.692
CAMKMT
Calmodulin-lysine N-methyltransferase.
     
 0.676
EED
Embryonic ectoderm development.
   
 0.633
DIS3L2
Rrp44_CSD1 domain-containing protein.
   
 
 0.630
NUP98
Nucleoporin 98.
   
 0.601
PRMT1
Protein arginine methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
   
 0.577
MRE11
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
   
 0.565
PRDM2
PR/SET domain 2.
   
 0.559
HUWE1
HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1.
   
  
 0.538
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.