STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LONRF2LON peptidase N-terminal domain and ring finger 2. (751 aa)    
Predicted Functional Partners:
TP53BP1
Tumor protein p53 binding protein 1.
    
 0.510
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.451
LOC100676713
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.447
UBE2N
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.447
UBE2V2
Ubiquitin conjugating enzyme E2 V2.
     
 0.443
RPS27A
Ubiquitin-like domain-containing protein.
   
  0.422
G3U9C8_LOXAF
Ubiquitin-like domain-containing protein.
   
  0.422
FAM171B
Family with sequence similarity 171 member B.
   
  
 0.422
RAD50
Zinc-hook domain-containing protein.
   
 0.407
UBB
Ubiquitin B.
    
 0.400
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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