STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PM20D2Peptidase M20 domain-containing protein 2; Belongs to the peptidase M20A family. (420 aa)    
Predicted Functional Partners:
PGRMC2
Progesterone receptor membrane component 2; Belongs to the cytochrome b5 family.
     
 0.583
MDN1
Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family.
    
 0.527
MAPK1IP1L
Mitogen-activated protein kinase 1 interacting protein 1 like.
    
 
 0.458
KLHL33
Kelch like family member 33.
      
 0.450
UBE2J1
Ubiquitin conjugating enzyme E2 J1.
    
 
 0.449
G3SR49_LOXAF
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.416
GAPDHS
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.416
G3U8F6_LOXAF
Gp_dh_C domain-containing protein.
    
 0.416
G3UNL7_LOXAF
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.416
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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