STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CHST10Carbohydrate sulfotransferase. (374 aa)    
Predicted Functional Partners:
DAG1
Dystroglycan 1.
     
 0.918
B3GAT2
Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family.
     
 0.893
B3GAT1
Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family.
     
 0.850
LOC100654158
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.677
B3GAT3
Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family.
     
 0.582
USP40
Ubiquitin specific peptidase 40; Belongs to the peptidase C19 family.
      
 0.567
ITIH2
Inter-alpha-trypsin inhibitor heavy chain 2.
      
 0.557
CPB2
Carboxypeptidase B2.
      
 0.546
SEMA4C
Semaphorin 4C; Belongs to the semaphorin family.
      
 0.539
ALG11
ALG11 alpha-1,2-mannosyltransferase.
      
 0.499
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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