STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFHC1EF-hand domain containing 1. (648 aa)    
Predicted Functional Partners:
G3TC70_LOXAF
Uncharacterized protein.
    
 
 0.898
PACRG
Parkin coregulated.
  
 
 0.839
CFAP52
Cilia and flagella associated protein 52.
  
 
 0.808
RIBC2
RIB43A domain with coiled-coils 2.
   
 
 0.771
TEKT1
Tektin 1.
   
 
 0.771
ENKUR
Enkurin, TRPC channel interacting protein.
   
 
 0.761
TEKT2
Tektin 2.
   
 
 0.750
TEKT3
Tektin 3.
   
 
 0.743
PACRGL
Parkin coregulated like.
   
 
 0.727
CFAP126
Cilia and flagella associated protein 126.
   
 
 0.727
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.