STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTGFRNProstaglandin F2 receptor inhibitor. (879 aa)    
Predicted Functional Partners:
CD9
Tetraspanin.
    
 
 0.899
CD81
Tetraspanin.
    
 
 0.862
G3T7D7_LOXAF
Uncharacterized protein.
    
 
 0.693
GDAP2
Ganglioside induced differentiation associated protein 2.
      
 0.578
CD99L2
Uncharacterized protein.
      
 0.530
TSPAN3
Tetraspanin.
    
 
 0.527
TSPAN8
Tetraspanin.
    
 
 0.505
TSPAN11
Tetraspanin.
    
 
 0.498
PTGFR
Prostaglandin F receptor; Belongs to the G-protein coupled receptor 1 family.
      
 0.485
WDR3
WD repeat domain 3.
      
 0.457
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.