Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LBPLipopolysaccharide binding protein. (481 aa)    
Predicted Functional Partners:
G3UH32_LOXAF
Uncharacterized protein.
   
 0.850
G3UMR8_LOXAF
Uncharacterized protein.
   
 0.850
TLR4
Toll like receptor 4; Belongs to the Toll-like receptor family.
   
 
 0.588
LY96
ML domain-containing protein.
     
 0.541
OCLN
Occludin_ELL domain-containing protein.
      
 0.481
G3U2U4_LOXAF
Serum amyloid A protein; Major acute phase reactant. Apolipoprotein of the HDL complex.
   
 
 0.452
MMP8
Matrix metallopeptidase 8.
   
 
 0.439
AZU1
Azurocidin 1.
   
 
 0.439
LTBP2
Latent transforming growth factor beta binding protein 2.
     
 0.427
MMP7
Matrix metallopeptidase 7.
   
 
 0.416
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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