STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSPAN18Tetraspanin. (248 aa)    
Predicted Functional Partners:
ARHGAP28
Rho GTPase activating protein 28.
      
 0.712
TP53I11
Tumor protein p53 inducible protein 11.
      
 0.583
NPSR1
Neuropeptide S receptor 1; Belongs to the G-protein coupled receptor 1 family. Vasopressin/oxytocin receptor subfamily.
      
 0.560
ASPRV1
Aspartic peptidase retroviral like 1.
      
 0.546
ORAI1
ORAI calcium release-activated calcium modulator 1.
    
 
 0.543
RGS10
RGS domain-containing protein.
      
 0.502
TSG101
Tumor susceptibility 101.
    
 
 0.492
G3U4G1_LOXAF
Ig-like domain-containing protein.
   
 0.479
MPPED2
Metallophosphoesterase domain containing 2.
      
 0.474
MPPED1
Metallophosphoesterase domain containing 1.
      
 0.474
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.