Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CPA5Carboxypeptidase A5. (436 aa)    
Predicted Functional Partners:
CARF
Calcium responsive transcription factor.
   
  
 0.815
CPA3
Carboxypeptidase A3.
   
 
 0.748
SSMEM1
Serine rich single-pass membrane protein 1.
      
 0.723
SERINC4
Serine incorporator 4.
   
  
 0.681
PPY
Pancreatic polypeptide; Belongs to the NPY family.
   
  
 0.678
NT5M
Uncharacterized protein.
      
 0.675
AIG1
Androgen induced 1.
      
 0.593
G3SSQ4_LOXAF
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
   
 
 0.586
G3TFS5_LOXAF
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
   
 
 0.586
CTRC
Chymotrypsin C; Belongs to the peptidase S1 family.
   
 
 0.586
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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