STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VSIG4V-set and immunoglobulin domain containing 4. (247 aa)    
Predicted Functional Partners:
C1QC
Complement C1q C chain.
   
  
 0.826
G3T2J6_LOXAF
Uncharacterized protein.
    
 
 0.557
C3
Complement C3.
    
 
 0.557
C4A
Uncharacterized protein.
    
 
 0.557
G5E743_LOXAF
Uncharacterized protein.
   
  
 0.552
G5E7B8_LOXAF
Uncharacterized protein.
   
  
 0.552
G3TTY7_LOXAF
Uncharacterized protein.
   
    0.507
CSF1R
Colony stimulating factor 1 receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
   
  
 0.500
CD207
CD207 molecule.
   
  
 0.402
CLEC4F
C-type lectin domain family 4 member F.
   
  
 0.402
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.