STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PLA2G6Phospholipase A2 group VI. (808 aa)    
Predicted Functional Partners:
PLA2G15
Phospholipase A2 group XV.
     
 0.938
PLA2G4A
Phospholipase A2.
     
 0.923
PLA2G7
Platelet-activating factor acetylhydrolase.
   
 
 0.912
CYP2U1
Cytochrome P450 family 2 subfamily U member 1; Belongs to the cytochrome P450 family.
     
 0.901
PAFAH2
Platelet-activating factor acetylhydrolase.
   
 
 0.897
SELENOI
Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.896
PLB1
Phospholipase B1.
     
 0.893
G3TIG3_LOXAF
Lipoxygenase domain-containing protein.
   
 
 0.889
PTGS1
Prostaglandin-endoperoxide synthase 1.
   
 0.886
PTGS2
Prostaglandin-endoperoxide synthase 2.
   
 0.886
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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