STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TM4SF18Transmembrane 4 L six family member 18. (201 aa)    
Predicted Functional Partners:
GIMD1
GIMAP family P-loop NTPase domain containing 1.
      
 0.502
CLUL1
CLb domain-containing protein.
  
     0.470
ZNF862
Zinc finger protein 862.
  
     0.427
THAP5
THAP domain containing 5.
  
     0.425
C16orf71
Chromosome 16 open reading frame 71.
  
     0.420
P2RY11
Purinergic receptor P2Y11; Belongs to the G-protein coupled receptor 1 family.
  
     0.415
ZNF200
Zinc finger protein 200.
  
     0.413
TRERF1
Transcriptional regulating factor 1.
  
     0.400
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.