STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MYLIPMyosin regulatory light chain interacting protein. (445 aa)    
Predicted Functional Partners:
LDLR
Low density lipoprotein receptor.
    
 0.988
LRP8
LDL receptor related protein 8.
    
 0.890
VLDLR
Very low density lipoprotein receptor.
    
 0.890
UBE2D1
Ubiquitin conjugating enzyme E2 D1; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.871
CNPY2
Saposin B-type domain-containing protein.
    
 
 0.798
FRMD6
FERM domain containing 6.
      
 0.774
CTR9
CTR9 homolog, Paf1/RNA polymerase II complex component.
   
  0.662
APAF1
Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.
   
 0.653
XPR1
Xenotropic and polytropic retrovirus receptor 1.
    
 
 0.648
PAF1
PAF1 homolog, Paf1/RNA polymerase II complex component.
    
   0.632
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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