STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GBGT1Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group). (347 aa)    
Predicted Functional Partners:
HEXB
Beta-hexosaminidase.
     
 0.853
NAGA
Alpha-galactosidase.
     
 0.794
HEXA
Beta-hexosaminidase.
     
  0.791
B3GALNT1
Hexosyltransferase.
     
 0.773
ABO
ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase.
     
  0.681
FUT4
Fucosyltransferase 4.
     
 0.655
FUT9
Fucosyltransferase 9.
     
 0.655
G3TWE4_LOXAF
Uncharacterized protein.
     
  0.651
G3UF63_LOXAF
Uncharacterized protein.
     
  0.651
FUT1
L-Fucosyltransferase; Belongs to the glycosyltransferase 11 family.
     
 0.590
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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