STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G2E3G2/M-phase specific E3 ubiquitin protein ligase. (718 aa)    
Predicted Functional Partners:
WDR6
WD repeat domain 6.
    
   0.782
GAS2L3
Growth arrest specific 2 like 3.
   
  
 0.761
SCFD1
Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family.
 
    
 0.750
DLGAP5
DLG associated protein 5.
   
  
 0.681
CKAP5
Cytoskeleton associated protein 5.
   
  
 0.646
CDCA2
Cell division cycle associated 2.
   
  
 0.635
KIF20B
Kinesin family member 20B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.634
KIF23
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.604
PRIM1
DNA primase; Belongs to the eukaryotic-type primase small subunit family.
   
  
 0.603
CBX5
Chromobox 5.
    
 0.600
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.