STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3SWQ4_LOXAFUncharacterized protein. (1052 aa)    
Predicted Functional Partners:
CANT1
Calcium activated nucleotidase 1.
      
 0.823
GRXCR1
Glutaredoxin and cysteine rich domain containing 1.
   
 
 0.777
GRXCR2
Glutaredoxin and cysteine rich domain containing 2.
   
 
 0.764
MOSPD1
Motile sperm domain containing 1.
      
 0.737
MRPS6
Mitochondrial ribosomal protein S6.
      
 0.737
ST8SIA3
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3; Belongs to the glycosyltransferase 29 family.
     
 0.637
TSPAN9
Tetraspanin.
    
 0.602
NPEPL1
Aminopeptidase like 1.
      
 0.602
RDX
Radixin.
    
 0.584
EZR
Ezrin.
    
  0.576
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.