STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM174CFamily with sequence similarity 174 member C. (130 aa)    
Predicted Functional Partners:
WDR18
WD repeat domain 18.
      
 0.505
LRRCC1
Leucine rich repeat and coiled-coil centrosomal protein 1.
      
 0.503
RBIS
Ribosomal biogenesis factor.
      
 0.503
ARHGAP45
Rho GTPase activating protein 45.
    
 
 0.495
POLR2E
RNA polymerase II subunit E.
      
 0.490
NCAPD3
Condensin-2 complex subunit D3; Regulatory subunit of the condensin-2 complex, a complex which establishes mitotic chromosome architecture and is involved in physical rigidity of the chromatid axis.
      
 0.471
VPS26B
VPS26, retromer complex component B.
      
 0.469
DAZAP1
DAZ associated protein 1.
      
 0.432
C12orf66
Chromosome 12 open reading frame 66.
    
 
 0.412
CCDC160
Coiled-coil domain containing 160.
      
 0.402
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.