Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
DNAJC8DnaJ heat shock protein family (Hsp40) member C8. (253 aa)    
Predicted Functional Partners:
PPP1R8
Protein phosphatase 1 regulatory subunit 8.
   
 
 0.937
SF3A2
Splicing factor 3a subunit 2.
    
 
 0.928
CDC40
Cell division cycle 40.
     
  0.923
SUGP1
SURP and G-patch domain containing 1.
     
  0.923
HTATSF1
HIV-1 Tat specific factor 1.
     
 0.921
TCERG1
Transcription elongation regulator 1.
   
 
  0.919
PRPF40A
Pre-mRNA processing factor 40 homolog A.
   
 
 0.899
DHX9
DExH-box helicase 9.
   
  0.899
SRRT
Serrate, RNA effector molecule.
   
 
  0.897
DDX5
DEAD-box helicase 5; Belongs to the DEAD box helicase family.
    
 0.882
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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