STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMASCytidine monophosphate N-acetylneuraminic acid synthetase. (434 aa)    
Predicted Functional Partners:
NANS
N-acetylneuraminate synthase.
 
  
 0.989
GAK
Cyclin G associated kinase.
   
 0.954
NANP
N-acetylneuraminic acid phosphatase.
     
 0.942
G3SM54_LOXAF
Rieske domain-containing protein.
     
 0.921
SNX6
Sorting nexin; Involved in several stages of intracellular trafficking.
   
 0.669
SNX5
Sorting nexin; Involved in several stages of intracellular trafficking.
   
 0.669
VPS35
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.642
DNAJC6
DnaJ heat shock protein family (Hsp40) member C6.
   
 0.575
VPS26A
VPS26, retromer complex component A.
   
 
 0.562
VPS26B
VPS26, retromer complex component B.
   
 
 0.554
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.