STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KDM7ALysine demethylase 7A. (882 aa)    
Predicted Functional Partners:
FBXL19
F-box and leucine rich repeat protein 19.
 
 
 0.838
PHF2
PHD finger protein 2.
     
  0.737
ARID5B
AT-rich interaction domain 5B.
    
 0.640
ST6GAL2
ST6 beta-galactoside alpha-2,6-sialyltransferase 2; Belongs to the glycosyltransferase 29 family.
      
 0.638
SETD4
SET domain containing 4.
      
 0.638
QSER1
Glutamine and serine rich 1.
   
  
 0.637
KDM3B
Lysine demethylase 3B.
   
 
 0.627
JMJD1C
Jumonji domain containing 1C.
   
 
 0.624
STK33
Serine/threonine kinase 33; Belongs to the protein kinase superfamily.
   
 
 0.565
RREB1
Ras responsive element binding protein 1.
    
 0.564
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.