STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYB5D2Cytochrome b5 domain containing 2; Belongs to the cytochrome b5 family. (204 aa)    
Predicted Functional Partners:
CYB5A
Cytochrome b5 type A; Belongs to the cytochrome b5 family.
   
  
 0.659
ANAPC16
Anaphase promoting complex subunit 16.
      
 0.549
PACC1
Proton activated chloride channel 1.
      
 0.520
ATAD3A
ATPase family AAA domain containing 3A.
      
 0.515
CYB5B
Cytochrome b5 type B; Belongs to the cytochrome b5 family.
   
  
 0.461
B4GALNT1
Beta-1,4 N-acetylgalactosaminyltransferase.
      
 0.450
RAB3IP
Sec2p domain-containing protein.
      
 0.447
GM2A
GM2 ganglioside activator.
      
 0.441
SSH1
Slingshot protein phosphatase 1.
      
 0.441
B3GALT4
Hexosyltransferase.
      
 0.437
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.