STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CYB5D2Cytochrome b5 domain containing 2; Belongs to the cytochrome b5 family. (204 aa)    
Predicted Functional Partners:
CYB5A
Cytochrome b5 type A; Belongs to the cytochrome b5 family.
   
  
 0.745
ANAPC16
Anaphase promoting complex subunit 16.
      
 0.727
ATAD3A
ATPase family AAA domain containing 3A.
      
 0.652
RAB3IP
Sec2p domain-containing protein.
      
 0.619
PACC1
Proton activated chloride channel 1.
      
 0.602
C17orf75
Chromosome 17 open reading frame 75.
      
 0.599
CYB5B
Cytochrome b5 type B; Belongs to the cytochrome b5 family.
   
  
 0.592
CIAO1
Probable cytosolic iron-sulfur protein assembly protein CIAO1; Key component of the cytosolic iron-sulfur protein assembly (CIA) complex, a multiprotein complex that mediates the incorporation of iron-sulfur cluster into extramitochondrial Fe/S proteins. Seems to specifically modulate the transactivation activity of WT1. As part of the mitotic spindle-associated MMXD complex it may play a role in chromosome segregation; Belongs to the WD repeat CIA1 family.
      
 0.568
B4GALNT1
Beta-1,4 N-acetylgalactosaminyltransferase.
      
 0.566
B4GALT7
Beta-1,4-galactosyltransferase 7.
      
 0.564
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.