STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RRP9Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein. (468 aa)    
Predicted Functional Partners:
NOP58
NOP58 ribonucleoprotein.
   
 0.997
SNU13
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.993
UTP4
UTP4 small subunit processome component.
   
 0.984
UTP18
UTP18 small subunit processome component.
   
 0.982
WDR43
WD repeat domain 43.
   
 0.980
UTP15
UTP15 small subunit processome component.
  
0.978
PWP2
WD_REPEATS_REGION domain-containing protein.
   
 0.978
WDR36
WD repeat domain 36.
   
 0.978
BYSL
Bystin like.
   
 
 0.978
FBLL1
Fibrillarin like 1.
   
 0.977
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.