STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
STOMStomatin. (264 aa)    
Predicted Functional Partners:
FLOT2
Flotillin; Belongs to the band 7/mec-2 family. Flotillin subfamily.
   
 
 0.634
ASIC3
Acid sensing ion channel subunit 3; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
    
 0.626
CAV3
Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.
    
 0.602
C1QBP
Complement C1q binding protein.
   
 0.563
RIC8B
RIC8 guanine nucleotide exchange factor B.
   
  
 0.553
RGS7
Regulator of G protein signaling 7.
      
 0.550
TTLL11
Tubulin tyrosine ligase like 11.
      
 0.544
KCNQ4
Potassium voltage-gated channel subfamily Q member 4; Belongs to the potassium channel family.
    
 
 0.540
AQP1
Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 
 0.539
ASIC5
Acid sensing ion channel subunit family member 5; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
    
 0.535
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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