STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNIH3Cornichon family AMPA receptor auxiliary protein 3. (179 aa)    
Predicted Functional Partners:
GRIA1
Glutamate ionotropic receptor AMPA type subunit 1.
   
 0.880
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
   
 0.823
GRIA3
Glutamate ionotropic receptor AMPA type subunit 3.
   
 0.716
GRIA4
Glutamate ionotropic receptor AMPA type subunit 4.
   
 0.685
CACNG8
Uncharacterized protein.
   
 
 0.638
TMED10
Transmembrane p24 trafficking protein 10.
   
 0.619
CNIH4
Cornichon family AMPA receptor auxiliary protein 4.
     
 0.576
CNIH1
Cornichon family AMPA receptor auxiliary protein 1.
  
  
0.549
TMED2
Transmembrane p24 trafficking protein 2.
    
 0.542
SEC24D
SEC24 homolog D, COPII coat complex component.
     
 0.531
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.