Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PACRGLParkin coregulated like. (248 aa)    
Predicted Functional Partners:
CFAP52
Cilia and flagella associated protein 52.
   
 
 0.853
CFAP20
Cilia and flagella associated protein 20.
    
 
 0.794
EFHC1
EF-hand domain containing 1.
   
 
 0.792
TEKT2
Tektin 2.
   
 
 0.790
CFAP126
Cilia and flagella associated protein 126.
   
 
 0.787
EFHC2
EF-hand domain containing 2.
   
 
 0.783
ENKUR
Enkurin, TRPC channel interacting protein.
   
 
 0.783
G3TC70_LOXAF
Uncharacterized protein.
    
 
 0.782
C1orf194
Chromosome 1 open reading frame 194.
   
 
 0.768
DNALI1
Dynein axonemal light intermediate chain 1.
   
 
 0.761
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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